STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3ESemaphorin-3E. (774 aa)    
Predicted Functional Partners:
PLXND1
Plexin-D1.
    
 0.995
LOC110090980
Protein EFR3 homolog A isoform X1.
      
 0.903
DOK4
Docking protein 4.
      
 0.899
PLXNC1
Plexin-C1 isoform X1.
    
 0.730
MFN2
Mitofusin 2.
      
 0.696
VDAC1
Voltage-dependent anion-selective channel protein 1 isoform X1.
      
 0.693
NRP1
Neuropilin-1 isoform X1.
    
 0.685
NRP2
Neuropilin-2 isoform X1.
    
 
 0.656
ENSPVIP00000000956
Plexin-A4.
    
 0.626
PLXNA1
Plexin-A1 isoform X1.
    
 0.626
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.