Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LYSMD4LysM and putative peptidoglycan-binding domain-containing protein 4. (284 aa)    
Predicted Functional Partners:
FAM174B
Family with sequence similarity 174 member B.
      
 0.696
ST8SIA2
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8B).
      
 0.664
PLS1
Plastin-1.
      
 0.636
LYSMD2
LysM and putative peptidoglycan-binding domain-containing protein 2.
      
 0.607
LYSMD1
LysM and putative peptidoglycan-binding domain-containing protein 1.
      
 0.489
RGMA
Repulsive guidance molecule A.
      
 0.471
RGMB
RGM domain family member B.
      
 0.471
ST8SIA4
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8D).
      
 0.437
CYP20A1
Cytochrome P450 family 20 subfamily A.
      
 0.430
PAN3
PAB-dependent poly(A)-specific ribonuclease subunit PAN3.
      
 0.419
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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