STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC28Leucine-rich repeat-containing protein 28 isoform X1. (375 aa)    
Predicted Functional Partners:
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.576
MIB2
E3 ubiquitin-protein ligase mind-bomb.
    
 0.533
LUM
Lumican.
  
 
  0.531
KERA
Keratocan.
  
 
  0.522
FMOD
Fibromodulin.
  
 
  0.521
PRELP
Proline arginine-rich end leucine-rich repeat protein.
  
 
  0.508
ITSN2
Intersectin-2 isoform X1.
   
 0.508
CHAD
Chondroadherin.
  
 
  0.484
LRRTM4
Leucine-rich repeat transmembrane neuronal protein 4.
  
 
  0.481
ENSPVIP00000015452
annotation not available
   
 0.457
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.