RFC5 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RFC5

Replication factor C subunit 3/5. (220 aa)

Predicted Functional Partners:

RFC4

0.999

RFC3

0.999

RFC2

0.998

RFC1

0.997

PCNA

0.992

RAD17

0.992

DSCC1

0.990

ATAD5

0.989

CHTF18

0.989

CHTF8

0.987

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD5	CHTF18	ENSPVIP00000000568	ENSPVIP00000023753	ATPase family AAA domain-containing protein 5 isoform X1.	Chromosome transmission fidelity factor 18.	0.958
ATAD5	CHTF8	ENSPVIP00000000568	ENSPVIP00000014730	ATPase family AAA domain-containing protein 5 isoform X1.	Chromosome transmission fidelity protein 8 homolog.	0.687
ATAD5	DSCC1	ENSPVIP00000000568	ENSPVIP00000024529	ATPase family AAA domain-containing protein 5 isoform X1.	Sister chromatid cohesion protein DCC1.	0.953
ATAD5	PCNA	ENSPVIP00000000568	ENSPVIP00000022458	ATPase family AAA domain-containing protein 5 isoform X1.	Proliferating cell nuclear antigen isoform X1.	0.980
ATAD5	RAD17	ENSPVIP00000000568	ENSPVIP00000034733	ATPase family AAA domain-containing protein 5 isoform X1.	Cell cycle checkpoint protein RAD17 isoform X1.	0.961
ATAD5	RFC1	ENSPVIP00000000568	ENSPVIP00000017340	ATPase family AAA domain-containing protein 5 isoform X1.	Replication factor C subunit 1.	0.684
ATAD5	RFC2	ENSPVIP00000000568	ENSPVIP00000005439	ATPase family AAA domain-containing protein 5 isoform X1.	Replication factor C subunit 2/4.	0.977
ATAD5	RFC3	ENSPVIP00000000568	ENSPVIP00000015067	ATPase family AAA domain-containing protein 5 isoform X1.	Replication factor C subunit 3 isoform X1.	0.977
ATAD5	RFC4	ENSPVIP00000000568	ENSPVIP00000014045	ATPase family AAA domain-containing protein 5 isoform X1.	Replication factor C subunit 4 isoform X1.	0.989
ATAD5	RFC5	ENSPVIP00000000568	ENSPVIP00000005371	ATPase family AAA domain-containing protein 5 isoform X1.	Replication factor C subunit 3/5.	0.989
CHTF18	ATAD5	ENSPVIP00000023753	ENSPVIP00000000568	Chromosome transmission fidelity factor 18.	ATPase family AAA domain-containing protein 5 isoform X1.	0.958
CHTF18	CHTF8	ENSPVIP00000023753	ENSPVIP00000014730	Chromosome transmission fidelity factor 18.	Chromosome transmission fidelity protein 8 homolog.	0.995
CHTF18	DSCC1	ENSPVIP00000023753	ENSPVIP00000024529	Chromosome transmission fidelity factor 18.	Sister chromatid cohesion protein DCC1.	0.998
CHTF18	PCNA	ENSPVIP00000023753	ENSPVIP00000022458	Chromosome transmission fidelity factor 18.	Proliferating cell nuclear antigen isoform X1.	0.987
CHTF18	RAD17	ENSPVIP00000023753	ENSPVIP00000034733	Chromosome transmission fidelity factor 18.	Cell cycle checkpoint protein RAD17 isoform X1.	0.947
CHTF18	RFC1	ENSPVIP00000023753	ENSPVIP00000017340	Chromosome transmission fidelity factor 18.	Replication factor C subunit 1.	0.898
CHTF18	RFC2	ENSPVIP00000023753	ENSPVIP00000005439	Chromosome transmission fidelity factor 18.	Replication factor C subunit 2/4.	0.989
CHTF18	RFC3	ENSPVIP00000023753	ENSPVIP00000015067	Chromosome transmission fidelity factor 18.	Replication factor C subunit 3 isoform X1.	0.989
CHTF18	RFC4	ENSPVIP00000023753	ENSPVIP00000014045	Chromosome transmission fidelity factor 18.	Replication factor C subunit 4 isoform X1.	0.993
CHTF18	RFC5	ENSPVIP00000023753	ENSPVIP00000005371	Chromosome transmission fidelity factor 18.	Replication factor C subunit 3/5.	0.989