STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TC2NTandem C2 domains, nuclear. (463 aa)    
Predicted Functional Partners:
TMEM200A
Transmembrane protein 200A.
      
 0.695
WDR48
WD repeat-containing protein 48.
      
 0.694
CATSPER3
Cation channel sperm-associated protein 3 isoform X1.
    
 
 0.644
CATSPER2
Cation channel sperm-associated protein 2.
    
 
 0.618
LOC110086590
Cation channel sperm-associated protein subunit beta-like.
 
 
  
 0.600
OTUD3
OTU domain-containing protein 3.
      
 0.571
SH3PXD2A
SH3 and PX domain-containing protein 2A isoform X1.
      
 0.566
ITSN2
Intersectin-2 isoform X1.
     
 0.531
SLC25A10
Solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10.
      
 0.481
CDO1
Cysteine dioxygenase type 1.
      
 0.477
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.