STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKFY1Rabankyrin-5. (1169 aa)    
Predicted Functional Partners:
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.805
SNX27
Sorting nexin-27.
    
 
 0.783
PIK3R4
Phosphoinositide-3-kinase, regulatory subunit 4.
     
 0.777
RAB5A
Ras-related protein Rab-5A.
   
 0.756
RAB5C
Ras-related protein Rab-5C.
   
 0.756
RAB5B
Ras-related protein Rab-5B.
   
 0.756
VPS26A
Vacuolar protein sorting-associated protein 26A.
    
 
 0.752
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1.
   
 
 0.723
KLHL33
Kelch-like protein 33.
     
 0.697
RBSN
Rabenosyn-5.
   
  
 0.662
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.