close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCD3Pentatricopeptide repeat domain 3. (566 aa)    
Predicted Functional Partners:
MRPS35
28S ribosomal protein S35, mitochondrial.
    
 0.999
MRPS22
28S ribosomal protein S22, mitochondrial isoform X1.
   
 0.998
MRPS31
28S ribosomal protein S31, mitochondrial isoform X1.
    
 0.997
DAP3
28S ribosomal protein S29, mitochondrial.
   
 0.996
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
   
 0.996
MRPS27
28S ribosomal protein S27, mitochondrial.
   
 0.996
MRPS11
28S ribosomal protein S11, mitochondrial.
    
 0.995
MRPS15
28S ribosomal protein S15, mitochondrial.
   
 0.995
MRPS10
28S ribosomal protein S10, mitochondrial.
    
 0.994
MRPS23
28S ribosomal protein S23, mitochondrial.
    
 0.994
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.