STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110089230Putative methyltransferase DDB_G0268948. (270 aa)    
Predicted Functional Partners:
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.574
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.540
BYSL
Essential nuclear protein 1.
   
 0.506
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
  0.474
RPS24
40S ribosomal protein S24 isoform X1.
   
  0.466
RPS11
Small subunit ribosomal protein S11e.
   
  0.460
RPS8
Small subunit ribosomal protein S8e.
    
  0.459
RPS7
40S ribosomal protein S7 isoform X1.
    
  0.456
NOB1
RNA-binding protein NOB1.
   
 0.456
ENSPVIP00000009521
annotation not available
    
 0.450
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.