STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP1Receptor accessory protein 1. (291 aa)    
Predicted Functional Partners:
ZFYVE27
Protrudin isoform X1.
    
 
 0.613
WASHC5
WASH complex subunit strumpellin.
      
 0.582
NIPA1
Magnesium transporter NIPA1.
      
 0.579
CNGA4
Cyclic nucleotide-gated cation channel alpha-4.
      
 0.559
SPG11
Spatacsin isoform X1.
      
 0.558
REEP2
Receptor expression-enhancing protein 1/2/3/4.
  
 
 
0.553
RTN4
Reticulon-4 isoform X1.
   
 
 0.535
DSTYK
Dual serine/threonine and tyrosine protein kinase isoform X1.
   
  
 0.521
RIC8B
Synembryn-B isoform X1.
      
 0.520
ATL3
Atlastin-3 isoform X1.
    
 
 0.501
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.