STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110089235Uroplakin-3b-like. (250 aa)    
Predicted Functional Partners:
UPK1B
Uroplakin-1b.
   
  
 0.842
UPK1A
Uroplakin-1a.
   
  
 0.758
LRRN4
Leucine-rich repeat neuronal protein 4.
   
  
 0.713
DTYMK
Thymidylate kinase isoform X1.
      
 0.617
GCHFR
GTP cyclohydrolase 1 feedback regulatory protein isoform X1.
      
 0.616
MNAT1
CDK-activating kinase assembly factor MAT1 isoform X1.
      
 0.599
LRRN4CL
LRRN4 C-terminal-like protein.
   
  
 0.597
LMBRD2
LMBR1 domain-containing protein 2.
      
 0.571
VAT1L
Vesicle amine transport 1 like.
      
 0.565
SH3BP4
SH3 domain-binding protein 4.
      
 0.506
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.