STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110080309Zinc finger matrin-type protein 1-like isoform X1. (533 aa)    
Predicted Functional Partners:
GSC2
Homeobox protein goosecoid-like.
      
 0.693
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
      
 0.573
ITFG1
Integrin alpha FG-GAP repeat containing protein 1.
      
 0.563
VSX1
Visual system homeobox protein 1.
      
 0.502
LOC110091595
Uncharacterized protein LOC110091595.
      
 0.489
ENSPVIP00000018546
annotation not available
      
 0.479
DQX1
DEAQ-box RNA dependent ATPase 1.
      
 0.475
KCTD9
BTB/POZ domain-containing protein KCTD9.
      
 0.434
ENSPVIP00000009003
annotation not available
      
 0.433
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
      
 0.433
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.