STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110080338Dual specificity protein phosphatase 13-like. (211 aa)    
Predicted Functional Partners:
TPPP
Tubulin polymerization-promoting protein.
   
  
 0.588
EPM2A
Atypical dual specificity phosphatase.
      
 0.574
VRK3
Inactive serine/threonine-protein kinase VRK3 isoform X1.
    
 0.551
SMIM12
Small integral membrane protein 12 isoform X1.
   
   0.481
CFAP61
Cilia- and flagella-associated protein 61 isoform X1.
    
 
 0.458
AP3M1
AP-3 complex subunit mu-1 isoform X1.
   
  
 0.440
AP3M2
AP-3 complex subunit mu-2.
   
  
 0.440
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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