STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMTD1Catechol O-methyltransferase domain-containing protein 1. (277 aa)    
Predicted Functional Partners:
DUS2
TRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1.
  
  
 0.762
MAP6D1
MAP6 domain containing 1.
    
 
 0.695
RCN2
Reticulocalbin 2.
      
 0.689
PAXBP1
GC-rich sequence DNA-binding factor.
      
 0.664
NAXE
NAD(P)H-hydrate epimerase.
      
 0.648
DISP2
Dispatched RND transporter family member 2.
      
 0.617
COX11
Cytochrome c oxidase assembly protein COX11, mitochondrial.
   
  
 0.612
TBC1D12
TBC1 domain family member 12.
      
 0.610
TK1
Thymidine kinase, cytosolic.
  
 
  0.595
SLC25A16
Solute carrier family 25 (mitochondrial carrier protein), member 16.
      
 0.590
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.