STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRMDALeucine rich melanocyte differentiation associated. (187 aa)    
Predicted Functional Partners:
SF3A3
Splicing factor 3a subunit 3.
   
 0.867
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.866
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.855
SNRPD2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
   
 0.843
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.839
SF3B3
Splicing factor 3B subunit 3.
    
 0.839
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.832
SF3A2
Splicing factor 3A subunit 2.
    
 0.829
PHF5A
PHD finger-like domain-containing protein 5A.
   
 0.818
SF3B4
Splicing factor 3B subunit 4.
   
 0.817
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.