STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRMDA-2Leucine-rich repeat-containing protein C10orf11 homolog isoform X1. (57 aa)    
Predicted Functional Partners:
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.918
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.911
SF3A3
Splicing factor 3a subunit 3.
   
 0.901
SNRPD2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
   
 0.895
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.888
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.886
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.884
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.882
SF3B3
Splicing factor 3B subunit 3.
    
 0.881
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.880
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.