STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72Guanine nucleotide exchange protein C9orf72. (481 aa)    
Predicted Functional Partners:
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.999
WDR41
WD repeat-containing protein 41 isoform X1.
    
 0.999
ATG13
Autophagy-related protein 13 isoform X1.
  
 
 0.995
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
    
 0.992
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.950
RAB39B
Ras-related protein Rab-39B.
    
 0.938
LMLN
Leishmanolysin-like peptidase isoform X1.
    
 0.936
RAB1A
Ras-related protein Rab-1A.
    
 0.926
LOC110075697
Ras-related protein ORAB-1-like isoform X1.
    
 0.926
ATG101
Autophagy-related protein 101.
    
 0.925
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.