STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72Guanine nucleotide exchange protein C9orf72. (481 aa)    
Predicted Functional Partners:
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.997
WDR41
WD repeat-containing protein 41 isoform X1.
    
 0.993
ATG13
Autophagy-related protein 13 isoform X1.
  
 
 0.991
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.990
RAB39B
Ras-related protein Rab-39B.
    
 0.988
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
    
 0.985
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.972
RAB8A
Ras-related protein Rab-8A.
    
 0.924
RAB42
Putative Ras-related protein Rab-42.
    
  0.911
TARDBP
TAR DNA-binding protein 43 isoform X1.
      
 0.904
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.