STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
   
 0.948
DHX9
ATP-dependent RNA helicase A isoform X1.
   
 0.805
RPL13A
Large subunit ribosomal protein L13Ae.
   
 0.787
YBX2
Y-box binding protein 2.
   
 0.765
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.738
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.675
SRSF3
Splicing factor, arginine/serine-rich 3.
   
 0.663
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3 isoform X1.
   
 0.647
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.638
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.638
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.