Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC19Leucine-rich repeat-containing protein 19. (376 aa)    
Predicted Functional Partners:
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
    
 0.657
KBTBD8
Kelch repeat and BTB domain-containing protein 8.
     
 0.622
TMEM214
Transmembrane protein 214.
      
 0.609
TRMT11
TRNA (guanine(10)-N2)-methyltransferase homolog isoform X1.
      
 0.585
ARMC10
Armadillo repeat-containing protein 10.
    
 0.583
IMMP2L
Mitochondrial inner membrane protease subunit 2.
      
 0.439
TUSC1
Tumor suppressor candidate gene 1 protein.
      
 0.421
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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