STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK3Ankyrin-3. (1123 aa)    
Predicted Functional Partners:
LOC110083590
Ankyrin-2-like.
 
      0.883
ENSPVIP00000005572
annotation not available
 
      0.743
NFASC
Neurofascin isoform X1.
   
 0.675
SPTAN1
Spectrin alpha chain, non-erythrocytic 1 isoform X1.
   
 0.613
TRPC5
Transient receptor potential cation channel subfamily C member 5.
     
 0.591
TRPA1
Transient receptor potential cation channel subfamily A member 1.
      
 0.581
NRCAM
Neuronal cell adhesion molecule.
    
 0.509
ENSPVIP00000013107
annotation not available
    
 0.509
RNF146
E3 ubiquitin-protein ligase RNF146.
    
 0.509
CHL1
Neural cell adhesion molecule L1-like protein isoform X1.
    
 0.509
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.