STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERLIN1Erlin-1-like. (368 aa)    
Predicted Functional Partners:
DERL1
Derlin-1.
    
 0.616
RNF185
E3 ubiquitin-protein ligase RNF185.
   
 0.597
RNF5
E3 ubiquitin-protein ligase RNF5-like isoform X1.
   
 0.597
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.596
SEL1L
Protein sel-1 homolog 1.
     
 0.583
UBC
Polyubiquitin-C.
    
 0.581
RNF170
E3 ubiquitin-protein ligase RNF170 isoform X1.
    
 
 0.542
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
   
 0.542
SEL1L2
Protein sel-1 homolog 2.
     
 0.509
LOC110082643
Transitional endoplasmic reticulum ATPase-like.
   
 0.507
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.