STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC6Coiled-coil domain-containing protein 6. (461 aa)    
Predicted Functional Partners:
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
    
 
 0.647
RET
Proto-oncogene tyrosine-protein kinase receptor Ret isoform X1.
      
 0.576
MPST
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
      
 0.565
PPP2R1A
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
 
 0.563
CCDC120
Coiled-coil domain-containing protein 120 isoform X1.
      
 0.561
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.560
PPME1
Protein phosphatase methylesterase 1.
      
 0.558
CCDC68
Coiled-coil domain-containing protein 68 isoform X1.
      
 0.557
PPP4R1
Serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1.
    
 
 0.498
LOC110081093
Serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1.
    
 
 0.498
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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