STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPCHeterogeneous nuclear ribonucleoprotein C. (323 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.949
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.932
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.925
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A1/A3.
   
 0.918
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1 isoform X1.
   
 0.918
RBMX
RNA-binding motif protein, X chromosome isoform X1.
    
0.911
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.581
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.504
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.489
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.487
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.