ENSPVIP00000005662 protein (Pogona vitticeps)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPVIP00000005662

annotation not available (137 aa)

Predicted Functional Partners:

VPS16

0.979

VPS39

0.977

VPS33A

0.975

VPS11

0.972

VPS41

0.952

TGFBRAP1

0.944

VPS8

0.937

VPS33B

0.880

TECPR2

0.841

VPS45

0.834

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPVIP00000005662	TECPR2	ENSPVIP00000005662	ENSPVIP00000021927	annotation not available	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	0.841
ENSPVIP00000005662	TGFBRAP1	ENSPVIP00000005662	ENSPVIP00000030082	annotation not available	Transforming growth factor beta receptor associated protein 1.	0.944
ENSPVIP00000005662	VPS11	ENSPVIP00000005662	ENSPVIP00000012268	annotation not available	Vacuolar protein sorting-associated protein 11 homolog isoform X1.	0.972
ENSPVIP00000005662	VPS16	ENSPVIP00000005662	ENSPVIP00000008954	annotation not available	VPS16 core subunit of CORVET and HOPS complexes.	0.979
ENSPVIP00000005662	VPS33A	ENSPVIP00000005662	ENSPVIP00000016546	annotation not available	Vacuolar protein sorting-associated protein 33A.	0.975
ENSPVIP00000005662	VPS33B	ENSPVIP00000005662	ENSPVIP00000014360	annotation not available	Vacuolar protein sorting-associated protein 33B isoform X1.	0.880
ENSPVIP00000005662	VPS39	ENSPVIP00000005662	ENSPVIP00000025927	annotation not available	Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.	0.977
ENSPVIP00000005662	VPS41	ENSPVIP00000005662	ENSPVIP00000004641	annotation not available	Vacuolar protein sorting-associated protein 41 homolog isoform X1.	0.952
ENSPVIP00000005662	VPS45	ENSPVIP00000005662	ENSPVIP00000027011	annotation not available	Vacuolar protein sorting-associated protein 45 isoform X1.	0.834
ENSPVIP00000005662	VPS8	ENSPVIP00000005662	ENSPVIP00000029496	annotation not available	Vacuolar protein sorting-associated protein 8 homolog isoform X1.	0.937
TECPR2	ENSPVIP00000005662	ENSPVIP00000021927	ENSPVIP00000005662	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	annotation not available	0.841
TECPR2	VPS11	ENSPVIP00000021927	ENSPVIP00000012268	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	Vacuolar protein sorting-associated protein 11 homolog isoform X1.	0.522
TECPR2	VPS16	ENSPVIP00000021927	ENSPVIP00000008954	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	VPS16 core subunit of CORVET and HOPS complexes.	0.896
TECPR2	VPS33A	ENSPVIP00000021927	ENSPVIP00000016546	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	Vacuolar protein sorting-associated protein 33A.	0.662
TECPR2	VPS33B	ENSPVIP00000021927	ENSPVIP00000014360	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	Vacuolar protein sorting-associated protein 33B isoform X1.	0.662
TECPR2	VPS41	ENSPVIP00000021927	ENSPVIP00000004641	Tectonin beta-propeller repeat-containing protein 2 isoform X1.	Vacuolar protein sorting-associated protein 41 homolog isoform X1.	0.898
TGFBRAP1	ENSPVIP00000005662	ENSPVIP00000030082	ENSPVIP00000005662	Transforming growth factor beta receptor associated protein 1.	annotation not available	0.944
TGFBRAP1	VPS11	ENSPVIP00000030082	ENSPVIP00000012268	Transforming growth factor beta receptor associated protein 1.	Vacuolar protein sorting-associated protein 11 homolog isoform X1.	0.998
TGFBRAP1	VPS16	ENSPVIP00000030082	ENSPVIP00000008954	Transforming growth factor beta receptor associated protein 1.	VPS16 core subunit of CORVET and HOPS complexes.	0.998
TGFBRAP1	VPS33A	ENSPVIP00000030082	ENSPVIP00000016546	Transforming growth factor beta receptor associated protein 1.	Vacuolar protein sorting-associated protein 33A.	0.996