STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110087650Histone H2A type 2-C-like. (129 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.981
KDM6B
Lysine demethylase 6B.
    
 0.695
KDM6A
Lysine-specific demethylase 6A isoform X1.
    
 0.695
ENSPVIP00000033314
annotation not available
 
 0.689
LOC110076067
Histone H2B 7-like.
 
 0.689
ENSPVIP00000006932
annotation not available
  
 0.683
LOC110071419
Histone H2B 5.
 
 0.683
ENSPVIP00000000351
Histone H2B 1/2/3/4/6-like.
 
 0.682
LOC110087655
Histone H2B 1/2/3/4/6-like.
 
 0.682
LOC110087654
Histone H2B 1/2/3/4/6-like.
 
 0.682
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.