STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRDProtein tyrosine phosphatase receptor type D. (1310 aa)    
Predicted Functional Partners:
IL1RAP
Interleukin-1 receptor accessory protein isoform X1.
    
 0.789
PTPRD-2
Receptor-type tyrosine-protein phosphatase delta isoform X1.
 
      0.754
NTRK3
Neurotrophic tyrosine kinase, receptor type 3.
   
 0.662
LRFN4
Leucine-rich repeat and fibronectin type-III domain-containing protein 4.
    
 0.610
GRB2
Growth factor receptor-binding protein 2.
    
 0.588
NTRK2
Neurotrophic tyrosine kinase receptor type 2.
   
 0.552
IL1RAPL1
Interleukin-1 receptor accessory protein-like 1.
    
 0.532
PPFIA4
Liprin-alpha-4 isoform X1.
    
 0.519
PPFIA1
Liprin-alpha-1 isoform X1.
    
 0.519
PPFIA3
Liprin-alpha-3 isoform X1.
    
 0.519
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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