Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC6-2Tetratricopeptide repeat protein 6. (1433 aa)    
Predicted Functional Partners:
TTC6
Tetratricopeptide repeat domain 6.
 
 
0.846
LEO1
RNA polymerase-associated protein LEO1.
    
 0.649
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
    
 0.464
INTS13
Protein asunder homolog isoform X1.
   
 0.459
INTS1
Integrator complex subunit 1-like.
    
 0.455
INTS11
Integrator complex subunit 11 isoform X1.
   
 0.438
INTS10
Integrator complex subunit 10 isoform X1.
    
 0.432
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 0.431
ENSPVIP00000006312
annotation not available
   
 0.429
NME8
Thioredoxin domain-containing protein 3.
   
 0.429
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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