ASB18 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ASB18

Ankyrin repeat and SOCS box protein 18. (437 aa)

Predicted Functional Partners:

SLF1

0.717

CCR10

0.679

LEO1

0.500

APOLD1

0.491

ANKRD31

0.464

ENSPVIP00000021499

0.457

ENSPVIP00000030651

0.456

CDKN2D

0.451

ANKRD22

0.436

ASB12

0.434

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD22	ANKRD31	ENSPVIP00000002461	ENSPVIP00000013513	Ankyrin repeat domain-containing protein 22 isoform X1.	Putative ankyrin repeat domain-containing protein 31.	0.498
ANKRD22	ASB12	ENSPVIP00000002461	ENSPVIP00000006823	Ankyrin repeat domain-containing protein 22 isoform X1.	Ankyrin repeat and SOCS box protein 12.	0.460
ANKRD22	ASB18	ENSPVIP00000002461	ENSPVIP00000005735	Ankyrin repeat domain-containing protein 22 isoform X1.	Ankyrin repeat and SOCS box protein 18.	0.436
ANKRD22	ENSPVIP00000021499	ENSPVIP00000002461	ENSPVIP00000021499	Ankyrin repeat domain-containing protein 22 isoform X1.	annotation not available	0.472
ANKRD22	ENSPVIP00000030651	ENSPVIP00000002461	ENSPVIP00000030651	Ankyrin repeat domain-containing protein 22 isoform X1.	annotation not available	0.464
ANKRD22	LEO1	ENSPVIP00000002461	ENSPVIP00000034142	Ankyrin repeat domain-containing protein 22 isoform X1.	RNA polymerase-associated protein LEO1.	0.500
ANKRD31	ANKRD22	ENSPVIP00000013513	ENSPVIP00000002461	Putative ankyrin repeat domain-containing protein 31.	Ankyrin repeat domain-containing protein 22 isoform X1.	0.498
ANKRD31	ASB12	ENSPVIP00000013513	ENSPVIP00000006823	Putative ankyrin repeat domain-containing protein 31.	Ankyrin repeat and SOCS box protein 12.	0.494
ANKRD31	ASB18	ENSPVIP00000013513	ENSPVIP00000005735	Putative ankyrin repeat domain-containing protein 31.	Ankyrin repeat and SOCS box protein 18.	0.464
ANKRD31	ENSPVIP00000021499	ENSPVIP00000013513	ENSPVIP00000021499	Putative ankyrin repeat domain-containing protein 31.	annotation not available	0.500
ANKRD31	ENSPVIP00000030651	ENSPVIP00000013513	ENSPVIP00000030651	Putative ankyrin repeat domain-containing protein 31.	annotation not available	0.458
ANKRD31	LEO1	ENSPVIP00000013513	ENSPVIP00000034142	Putative ankyrin repeat domain-containing protein 31.	RNA polymerase-associated protein LEO1.	0.500
APOLD1	ASB18	ENSPVIP00000033908	ENSPVIP00000005735	Apolipoprotein L domain-containing protein 1.	Ankyrin repeat and SOCS box protein 18.	0.491
APOLD1	LEO1	ENSPVIP00000033908	ENSPVIP00000034142	Apolipoprotein L domain-containing protein 1.	RNA polymerase-associated protein LEO1.	0.524
APOLD1	SLF1	ENSPVIP00000033908	ENSPVIP00000035083	Apolipoprotein L domain-containing protein 1.	SMC5-SMC6 complex localization factor protein 1 isoform X1.	0.491
ASB12	ANKRD22	ENSPVIP00000006823	ENSPVIP00000002461	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat domain-containing protein 22 isoform X1.	0.460
ASB12	ANKRD31	ENSPVIP00000006823	ENSPVIP00000013513	Ankyrin repeat and SOCS box protein 12.	Putative ankyrin repeat domain-containing protein 31.	0.494
ASB12	ASB18	ENSPVIP00000006823	ENSPVIP00000005735	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 18.	0.434
ASB12	CDKN2D	ENSPVIP00000006823	ENSPVIP00000006098	Ankyrin repeat and SOCS box protein 12.	Cyclin-dependent kinase 4 inhibitor D isoform X1.	0.497
ASB12	LEO1	ENSPVIP00000006823	ENSPVIP00000034142	Ankyrin repeat and SOCS box protein 12.	RNA polymerase-associated protein LEO1.	0.500