STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC6Tetratricopeptide repeat domain 6. (618 aa)    
Predicted Functional Partners:
TTC6-2
Tetratricopeptide repeat protein 6.
0.868
HCFC2
Host cell factor 2.
   
 0.864
HCFC1
Host cell factor C1.
   
 0.864
MCRS1
Microspherule protein 1 isoform X1.
     
 0.820
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 
 0.787
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 
 0.787
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.780
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1.
    
 0.689
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
    
 0.689
TEX30
Testis-expressed protein 30 isoform X1.
    
 0.626
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.