STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23AProtein transport protein Sec23A. (765 aa)    
Predicted Functional Partners:
SEC13
Protein transport protein SEC13.
   
 0.994
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.994
SEC24C
Protein transport protein Sec24C isoform X1.
   
0.984
SEC24D
Protein transport protein Sec24D.
   
0.977
SEC24A
Protein transport protein Sec24A isoform X1.
   
0.973
SEC24B
Protein transport protein Sec24B isoform X1.
   
0.970
SEC16A
SEC16 homolog A, endoplasmic reticulum export factor.
   
 0.917
BET1
Blocked early in transport 1.
    
 0.867
SAR1B
GTP-binding protein SAR1b.
    
 0.863
SAR1A
GTP-binding protein SAR1a.
    
 0.863
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.