Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC6BTrafficking protein particle complex subunit 6B. (163 aa)    
Predicted Functional Partners:
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein isoform X1.
   
 0.998
TRAPPC5
Trafficking protein particle complex subunit 5.
    
 0.998
TRAPPC1
Trafficking protein particle complex 1.
   
 0.997
TRAPPC12
Trafficking protein particle complex subunit 12.
    
 0.997
TRAPPC4
LOW QUALITY PROTEIN: trafficking protein particle complex subunit 4.
   
 0.997
TRAPPC8
Trafficking protein particle complex subunit 8 isoform X1.
    
 0.995
TRAPPC2B
Trafficking protein particle complex subunit 2 isoform X1.
   
 0.995
TRAPPC10
Trafficking protein particle complex subunit 10.
    
 0.995
TRAPPC13
Trafficking protein particle complex subunit 13 isoform X1.
   
 0.993
TRAPPC11
Trafficking protein particle complex subunit 11.
    
 0.992
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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