STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNNPinin. (694 aa)    
Predicted Functional Partners:
RNPS1
RNA-binding protein with serine-rich domain 1 isoform X1.
   
 0.997
SAP18
Histone deacetylase complex subunit SAP18.
    
 0.996
ACIN1
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.988
PRPF4B
Serine/threonine-protein kinase PRP4 homolog.
   
 0.977
EIF4A3
Eukaryotic initiation factor 4A-III.
    
 0.976
MAGOH
Protein mago nashi homolog.
   
 0.972
BCLAF1
Bcl-2-associated transcription factor 1 isoform X1.
   
 
 0.955
CASC3
CASC3 exon junction complex subunit.
    
 0.945
PPIG
Peptidyl-prolyl isomerase G (cyclophilin G).
   
 0.943
PNISR
Splicing factor, arginine/serine-rich 18.
   
 
 0.935
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.