STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UROSUroporphyrinogen-III synthase isoform X1. (332 aa)    
Predicted Functional Partners:
HMBS
Porphobilinogen deaminase isoform X1.
  
 0.998
UROD
Uroporphyrinogen decarboxylase.
  
 
 0.996
ALAD
Delta-aminolevulinic acid dehydratase.
  
 0.991
CPOX
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial.
     
 0.911
FECH
Protoporphyrin/coproporphyrin ferrochelatase.
  
  
 0.901
ENDOV
Endonuclease V.
  
 
 0.794
PPOX
Protoporphyrinogen/coproporphyrinogen III oxidase.
  
  
 0.777
PRDM5
PR/SET domain 5.
      
 0.747
BCCIP
BRCA2 and CDKN1A-interacting protein isoform X1.
   
  
 0.708
DDX42
ATP-dependent RNA helicase DDX42 isoform X1.
  
  
 0.700
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.