STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBOF1Basal body-orientation factor 1. (536 aa)    
Predicted Functional Partners:
CFAP206
Cilia- and flagella-associated protein 206.
    
 
 0.907
GK
Glycerol kinase isoform X1.
   
  
 0.903
CCDC78
Coiled-coil domain-containing protein 78.
    
 
 0.710
ENSPVIP00000024830
annotation not available
    
 
 0.700
CCDC113
Coiled-coil domain-containing protein 113.
   
   0.630
INTS8
Integrator complex subunit 8 isoform X1.
    
 0.607
SACS
Sacsin isoform X1.
    
 0.584
GPR160
Probable G-protein coupled receptor 160.
      
 0.573
DDX59
Probable ATP-dependent RNA helicase DDX59.
    
 
 0.570
TMEM231
Transmembrane protein 231.
      
 0.563
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.