STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDRF1Erythroid differentiation-related factor 1 isoform X1. (1247 aa)    
Predicted Functional Partners:
HSPBP1
Hsp70-binding protein 1 isoform X1.
   
 
 0.874
TTC4
Tetratricopeptide repeat protein 4 isoform X1.
    
   0.852
CHORDC1
Cysteine and histidine-rich domain-containing protein 1 isoform X1.
    
   0.768
LARP1B
La-related protein 1B isoform X1.
      
 0.637
PLPP6
Presqualene diphosphate phosphatase.
      
 0.608
GPR182
G-protein coupled receptor 182.
      
 0.572
IGSF5
Immunoglobulin superfamily member 5 isoform X1.
      
 0.564
SPTY2D1
Protein SPT2 homolog isoform X1.
      
 0.544
PACC1
Transmembrane protein 206.
      
 0.496
PPFIBP2
PPFIA binding protein 2.
      
 0.494
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.