Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEBPGCCAAT/enhancer binding protein (C/EBP), gamma. (150 aa)    
Predicted Functional Partners:
ATF4
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.977
DDIT3
DNA damage-inducible transcript 3 protein.
   
 0.946
ATF5
Cyclic AMP-dependent transcription factor ATF-5.
   
 0.940
ATF3
Cyclic AMP-dependent transcription factor ATF-3.
   
 0.889
TRIB3
Tribbles homolog 3.
   
 0.743
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial isoform X1.
   
 0.698
MKS1
Meckel syndrome type 1 protein isoform X1.
      
 0.695
LOC110074003
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.672
JUN
Transcription factor AP-1.
    
 0.669
FOS
Proto-oncogene protein c-fos.
   
 0.664
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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