STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD1A[histone H3]-lysine4 N-trimethyltransferase SETD1. (1697 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase isoform X1.
     
 0.909
ENSPVIP00000005908
annotation not available
 
      0.899
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.888
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.877
WDR82
WD repeat-containing protein 82 isoform X1.
   
 0.875
CXXC1
CXXC finger protein 1.
   
 0.873
WDR5B
WD repeat-containing protein 5.
   
 0.813
HCFC2
Host cell factor 2.
   
 0.794
HCFC1
Host cell factor C1.
   
 0.794
DPY30
Protein dpy-30 homolog.
    
 0.779
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.