STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OATOrnithine aminotransferase, mitochondrial. (487 aa)    
Predicted Functional Partners:
ASL
Argininosuccinate lyase.
  
 
 0.997
ARG2
Arginase-2, mitochondrial isoform X1.
  
 0.997
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
   
 0.996
OTC
Ornithine carbamoyltransferase, mitochondrial isoform X1.
 
 
 0.980
ALDH4A1
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial.
  
 0.974
ARG1
Arginase 1.
  
 0.971
ODC1
Ornithine decarboxylase.
  
 
 0.965
ENSPVIP00000005935
annotation not available
  
 0.944
ASS1
Argininosuccinate synthase.
  
 0.944
GLUD1
Glutamate dehydrogenase 1, mitochondrial.
  
 
 0.933
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.