STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110077995Pregnancy zone protein-like. (299 aa)    
Predicted Functional Partners:
CBX8
Chromobox protein homolog 8.
    
 0.567
PCGF2
Polycomb group RING finger protein 2.
    
 0.500
SCMH1
Polycomb protein SCMH1 isoform X1.
    
 0.500
SCML2
Sex comb on midleg-like protein 2 isoform X1.
    
 0.500
LOC110083403
Polycomb group RING finger protein 4.
    
 0.500
RING1
E3 ubiquitin-protein ligase RNF1/2.
    
 0.495
RNF2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.495
CBX4
E3 SUMO-protein ligase CBX4.
    
 0.473
C3AR1
C3a anaphylatoxin chemotactic receptor.
    
 0.461
CFI
Complement factor I.
   
 0.458
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.