STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086393Perforin-1-like. (562 aa)    
Predicted Functional Partners:
LOC110086504
Protein NKG7-like.
   
  
 0.950
CD8A
T-cell surface glycoprotein CD8 alpha chain isoform X1.
   
  
 0.916
LOC110089570
Perforin-1-like isoform X1.
  
  
 
0.905
CTSW
Cathepsin W isoform X1.
   
 
 0.884
FASLG
Tumor necrosis factor ligand superfamily member 6 isoform X1.
   
 
 0.822
CD247
T-cell surface glycoprotein CD3 zeta chain isoform X1.
   
  
 0.758
LOC110075093
Interferon gamma-like.
   
  
 0.743
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
     
 0.699
TBX21
T-box transcription factor TBX21 isoform X1.
   
  
 0.668
LAMP1
Lysosome-associated membrane glycoprotein 1.
      
 0.629
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.