STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF668Zinc finger protein 668 isoform X1. (618 aa)    
Predicted Functional Partners:
NOL12
Ribosomal RNA-processing protein 17.
    
   0.875
GPATCH4
G patch domain-containing protein 4 isoform X1.
    
   0.768
UBE3D
E3 ubiquitin-protein ligase E3D isoform X1.
     
 0.710
GALNT7
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.694
SEC23IP
SEC23-interacting protein.
      
 0.694
GTF2F1
General transcription factor IIF subunit 1.
    
 0.640
RPL3
Large subunit ribosomal protein L3e.
    
   0.616
ZNF512
Zinc finger protein 512.
    
  0.615
RRP8
Ribosomal RNA processing 8.
   
   0.609
BCDIN3D
Pre-miRNA 5'-monophosphate methyltransferase.
      
 0.599
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.