Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YIPF2Protein YIPF1/2. (323 aa)    
Predicted Functional Partners:
YIPF6
Yip1 domain family member 6.
   
 
 0.891
YIPF4
Protein YIPF4.
   
 
 0.763
YIPF5
Protein YIPF5 isoform X1.
   
 
 0.662
YIPF7
Yip1 domain family member 7.
   
 
 0.662
LOC110084020
Golgi apparatus membrane protein TVP23 homolog B-like isoform X1.
   
 
 0.650
TVP23A
Golgi apparatus membrane protein TVP23 homolog A isoform X1.
   
 
 0.650
YIPF3
Protein YIPF3.
   
  
 0.623
SELENOS
Selenoprotein S.
   
 
 0.615
YIF1B
Protein transport protein YIF1.
   
  
 0.506
YIF1A
Protein transport protein YIF1.
   
  
 0.506
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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