Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110077941Homeobox protein NANOG-like. (336 aa)    
Predicted Functional Partners:
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
   
 0.997
ENSPVIP00000033533
annotation not available
   
 0.963
SALL4
Sal-like protein 4 isoform X1.
   
 0.963
LOC110081661
Nuclear receptor subfamily 0 group B member 2-like.
   
 
 0.890
NR0B1
Nuclear receptor subfamily 0 group B member 1.
   
 
 0.890
GATA6
Transcription factor GATA-6 isoform X1.
    
 
 0.887
RIF1
Telomere-associated protein RIF1 isoform X1.
    
 
 0.851
GATAD2A
Transcriptional repressor p66-alpha isoform X1.
    
 
 0.849
LIN28A
Protein lin-28 homolog A.
   
 0.848
PRDM14
PR/SET domain 14.
    
 0.845
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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