STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000005963annotation not available (104 aa)    
Predicted Functional Partners:
GTF2H1
Transcription initiation factor TFIIH subunit 1.
    
 0.983
ERCC3
LOW QUALITY PROTEIN: TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.978
GTF2H4
Transcription initiation factor TFIIH subunit 4.
   
 0.976
GTF2H5
TFIIH basal transcription factor complex TTD-A subunit.
    
 0.972
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.972
LOC110077355
Transcription initiation factor TFIIH subunit 2.
   
 0.967
CDK7
Cyclin dependent kinase 7.
   
 0.950
CCNH
Cyclin H.
   
 0.911
MNAT1
CDK-activating kinase assembly factor MAT1 isoform X1.
   
 0.905
GTF2A2
Transcription initiation factor TFIIA small subunit.
    
 0.882
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.