STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000005966Interferon-induced very large GTPase 1-like. (173 aa)    
Predicted Functional Partners:
ENSPVIP00000020409
annotation not available
    
 0.552
FANCM
Fanconi anemia group M protein.
    
 0.552
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.529
POLD2
DNA polymerase delta subunit 2.
    
 0.529
DDX20
Probable ATP-dependent RNA helicase DDX20.
   
 0.510
ENSPVIP00000005977
Up-regulator of cell proliferation-like.
 
    0.507
ARHGEF3
Rho guanine nucleotide exchange factor 3 isoform X1.
    
 
 0.503
NET1
Neuroepithelial cell-transforming gene 1 protein isoform X1.
    
 
 0.503
POLD1
DNA polymerase delta catalytic subunit.
    
 0.495
SMN1
Survival motor neuron protein.
    
 0.486
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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