Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086420Integrin alpha-M-like. (1170 aa)    
Predicted Functional Partners:
ITGB2
Integrin beta-2 isoform X1.
   
 0.967
JAM3
Junctional adhesion molecule C isoform X1.
    
 0.933
PTK2
Focal adhesion kinase 1 isoform X1.
    
 0.735
ITGB1
Integrin beta-1 isoform X1.
   
 0.693
ITGB7
Integrin beta-7 isoform X1.
   
 0.693
LOC110081775
Proto-oncogene C-crk.
     
 0.688
CRKL
Proto-oncogene C-crk.
     
 0.688
CRK
LOW QUALITY PROTEIN: adapter molecule crk.
     
 0.688
SRC
Proto-oncogene tyrosine-protein kinase Src isoform X1.
   
 0.688
FN1
Fibronectin isoform X1.
    
  0.662
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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