STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH1CHarmonin isoform X1. (549 aa)    
Predicted Functional Partners:
USH1G
Usher syndrome type-1G protein.
    
 0.988
ANKS4B
Ankyrin repeat and SAM domain-containing protein 4B.
    
 0.973
WHRN
Whirlin.
     
0.954
PDZD7
PDZ domain-containing protein 7 isoform X1.
     
0.941
CDH23
Cadherin 23.
   
 0.899
CDHR2
Cadherin-related family member 2.
   
 0.836
USH2A
LOW QUALITY PROTEIN: usherin.
    
 0.783
PCDH15
Protocadherin-15 isoform X1.
   
 0.772
ADGRV1
Adhesion G-protein coupled receptor V1.
    
 0.724
ENSPVIP00000009180
Syntaxin 1B/2/3.
     
 0.688
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.