Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
QTRT1LOW QUALITY PROTEIN: queuine tRNA-ribosyltransferase catalytic subunit 1. (391 aa)    
Predicted Functional Partners:
QTRT2
Queuine tRNA-ribosyltransferase accessory subunit 2.
  
0.983
GCDH
Glutaryl-CoA dehydrogenase, mitochondrial.
   
  
 0.906
WDYHV1
Protein N-terminal glutamine amidohydrolase isoform X1.
      
 0.906
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
      
 0.898
TRABD
TraB domain-containing protein.
      
 0.872
BCKDK
3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial.
  
  
 0.847
USP14
Ubiquitin carboxyl-terminal hydrolase 14 isoform X1.
      
 0.815
APBB2
Amyloid beta A4 precursor protein-binding family B member 2 isoform X1.
    
   0.728
APBB1
Amyloid beta A4 precursor protein-binding family B member 1.
    
   0.728
NUDT22
Nucleoside diphosphate-linked moiety X motif 22.
      
 0.696
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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