Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC5Armadillo repeat-containing protein 5. (1150 aa)    
Predicted Functional Partners:
CCZ1
Vacuolar fusion protein CCZ1 homolog.
    
 0.833
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
   
 0.763
GDI1
Rab GDP dissociation inhibitor alpha.
   
 0.763
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.743
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 
 0.742
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
    
 
 0.742
VPS35
Vacuolar protein sorting-associated protein 35.
    
 
 0.679
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.672
GRIPAP1
GRIP1-associated protein 1 isoform X1.
    
 0.666
MON1B
Vacuolar fusion protein MON1 homolog B-like isoform X1.
    
 0.666
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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