STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC5Armadillo repeat-containing protein 5. (1150 aa)    
Predicted Functional Partners:
VPS41
Vacuolar protein sorting-associated protein 41 homolog isoform X1.
    
 
 0.836
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.836
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
    
 
 0.832
CCZ1
Vacuolar fusion protein CCZ1 homolog.
    
 0.821
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
    
 0.803
GDI1
Rab GDP dissociation inhibitor alpha.
    
 0.803
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
 0.714
ENSPVIP00000005662
annotation not available
   
 
 0.697
VPS18
Vacuolar protein sorting-associated protein 18 homolog.
   
 
 0.697
VPS33B
Vacuolar protein sorting-associated protein 33B isoform X1.
    
 
 0.692
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.