STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110071729Ubiquitin-conjugating enzyme E2 L3-like. (147 aa)    
Predicted Functional Partners:
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.996
UBE2L3
Ubiquitin-conjugating enzyme E2 L3.
  
0.940
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.911
UBC
Polyubiquitin-C.
   
 0.910
ISG15
ISG15 ubiquitin like modifier.
   
 0.890
RPS27A
Ribosomal protein S27a.
   
 0.878
ENSPVIP00000019489
annotation not available
   
 0.873
ENSPVIP00000025015
E3 ubiquitin-protein ligase ARIH1-like.
   
 0.873
ARIH1
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ARIH1-like.
   
 0.873
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2 isoform X1.
   
 0.843
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.