STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000006071annotation not available (76 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 0.903
APPL2
DCC-interacting protein 13-beta.
    
 
 0.819
APPL1
DCC-interacting protein 13 alpha.
    
 
 0.819
RBSN
Rabenosyn-5.
    
 0.703
VPS45
Vacuolar protein sorting-associated protein 45 isoform X1.
    
 0.647
ANKFY1
Rabankyrin-5.
    
 0.640
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
   
 0.623
GDI1
Rab GDP dissociation inhibitor alpha.
   
 0.623
GAK
Cyclin-G-associated kinase isoform X1.
    
 0.597
ANKRD27
Ankyrin repeat domain-containing protein 27 isoform X1.
    
 0.558
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.